MERNA

A Database of Metal Ion Binding Sites in RNA

16 PDB files have been found to contain the metal ion Manganese as specified per your search criterion:

• 1EHZ (3 Mn ions) (Within 6 Angstroms of any RNA atom) - The crystal structure of yeast phenylalanine trna at 1.93 a resolution
• 1N1H (2 Mn ions) (Within 6 Angstroms of any RNA atom) - Initiation complex of polymerase lambda3 from reovirus
• 1N35 (2 Mn ions) (Within 6 Angstroms of any RNA atom) - Lambda3 elongation complex with four phosphodiester bond formed
• 1N38 (2 Mn ions) (Within 6 Angstroms of any RNA atom) - Reovirus polymerase lambda3 elongation complex with one phosphodiester bond formed
• 1NB7 (4 Mn ions) (Within 6 Angstroms of any RNA atom) - Hc-j4 rna polymerase complexed with short rna template strand
• 1UVI (3 Mn ions) (Within 6 Angstroms of any RNA atom) - The structural basis for rna specificity and ca2 inhibition of an rna-dependent rna polymerase phi6p2 with 6nt rna
• 1UVJ (3 Mn ions) (Within 6 Angstroms of any RNA atom) - The structural basis for rna specificity and ca2 inhibition of an rna-dependent rna polymerase phi6p2 with 7nt rna
• 1UVM (3 Mn ions) (Within 6 Angstroms of any RNA atom) - The structural basis for rna specificity and ca2 inhibition of an rna-dependent rna polymerase phi6p2 with 5nt rna conformation a
• 1Y3O (4 Mn ions) (Within 6 Angstroms of any RNA atom) - Hiv-1 dis rna subtype f- mn soaked
• 1Y90 (12 Mn ions) (Within 6 Angstroms of any RNA atom) - Hiv-1 dis(mal) duplex mn-soaked
• 1YN2 (4 Mn ions) (Within 6 Angstroms of any RNA atom) - Solution structure of the neurospora vs ribozyme stem-loop v in the presence of mgcl2 with modeling of bound manganese ions
• 283D (1 Mn ion) (Within 6 Angstroms of any RNA atom) - A curved rna helix incorporating an internal loop with g-a and a-a non-watson-crick base pairing
• 2BGG (2 Mn ions) (Within 6 Angstroms of any RNA atom) - The structure of a piwi protein from archaeoglobus fulgidus complexed with a 16nt sirna duplex
• 2G8I (4 Mn ions) (Within 6 Angstroms of any RNA atom) - B. halodurans rnase h catalytic domain d192n mutant in complex with mn2+ and rna/dna hybrid (non-p nick at the active site)
• 2HOJ (12 Mn ions) (Within 6 Angstroms of any RNA atom) - Crystal structure of an e. coli thi-box riboswitch bound to thiamine pyrophosphate, manganese ions
• 300D (6 Mn ions) (Within 6 Angstroms of any RNA atom) - Capturing the structure of a catalytic rna intermediate

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